chem-bla-ics: Harmonized identifiers in the WikiPathways RDF

lkfitz's bookmarks 2016-07-03

Summary:

"WikiPathways described biological processes. Entities in these processes are genes, gene products, like miRNAs, proteins, and metabolites."

...

"To ensure experimental data can be mapped to these pathways, independent of whatever identifiers are used, BridgeDb was developed. WikiPathways uses a BridgeDb webservice, Open PHACTS embeds BridgeDb technologies in their Identifier Mapping Service (particularly developed by Carole Goble's team), and PathVisio uses local BridgeD ID mapping files."

Link:

http://chem-bla-ics.blogspot.com/2016/07/harmonized-identifiers-in-wikipathways.html

From feeds:

Open Access Tracking Project (OATP) ยป lkfitz's bookmarks

Tags:

oa.new oa.biology oa.open_science oa.tools oa.metadata oa.code4oa oa.software

Date tagged:

07/03/2016, 16:49

Date published:

07/03/2016, 12:49