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📚BioDBS Bibliography

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412857

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Toward a complete dataset of drug-drug interaction information from publicly available sources

https://pubmed.ncbi.nlm.nih.gov/25917055/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 04/29/2015
Utilizing the Wikidata system to improve the quality of medical content in Wikipedia in diverse languages: a pilot study

https://pubmed.ncbi.nlm.nih.gov/25944105/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 05/07/2015
Wikidata as a semantic framework for the Gene Wiki initiative

https://pubmed.ncbi.nlm.nih.gov/26989148/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 03/19/2016
Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes

https://pubmed.ncbi.nlm.nih.gov/27022157/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 03/30/2016
WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata

https://pubmed.ncbi.nlm.nih.gov/28365742/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 04/03/2017
RDFIO: extending Semantic MediaWiki for interoperable biomedical data management

https://pubmed.ncbi.nlm.nih.gov/28870259/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 09/06/2017
UMLS to DBPedia link discovery through circular resolution

https://pubmed.ncbi.nlm.nih.gov/29648604/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 04/13/2018
ChlamBase: a curated model organism database for the Chlamydia research community

https://pubmed.ncbi.nlm.nih.gov/30985891/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 04/16/2019
Semalytics: a semantic analytics platform for the exploration of distributed and heterogeneous cancer data in translational research

https://pubmed.ncbi.nlm.nih.gov/31287543/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 07/10/2019
Wikidata: A large-scale collaborative ontological medical database

https://pubmed.ncbi.nlm.nih.gov/31557529/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 09/27/2019
GeneDB and Wikidata

https://pubmed.ncbi.nlm.nih.gov/31723674/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 11/19/2019
Bootstrapping Knowledge Graphs From Images and Text

https://pubmed.ncbi.nlm.nih.gov/31798437/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 12/05/2019
Wikidata as a knowledge graph for the life sciences

https://pubmed.ncbi.nlm.nih.gov/32180547/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 03/18/2020
Opening up connectivity between documents, structures and bioactivity

https://pubmed.ncbi.nlm.nih.gov/32280387/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 04/14/2020
An open-source GIS-enabled lookup service for Nagoya Protocol party information

https://pubmed.ncbi.nlm.nih.gov/32283554/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 04/14/2020
Developing an automated mechanism to identify medical articles from wikipedia for knowledge extraction

https://pubmed.ncbi.nlm.nih.gov/32693245/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 07/22/2020
Sense identification data: A dataset for lexical semantics

https://pubmed.ncbi.nlm.nih.gov/32984463/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 09/28/2020
WikiPathways: connecting communities

https://pubmed.ncbi.nlm.nih.gov/33211851/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 11/19/2020
Integration of the Drug-Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts

https://pubmed.ncbi.nlm.nih.gov/33237278/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 11/25/2020
A protocol for adding knowledge to Wikidata: aligning resources on human coronaviruses

https://pubmed.ncbi.nlm.nih.gov/33482803/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 01/23/2021
Intercessory Rote Prayer, Life Longevity and the Mortality of Roman Catholic Bishops: An Exploratory Study

https://pubmed.ncbi.nlm.nih.gov/33721174/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 03/15/2021
20 GB in 10 minutes: a case for linking major biodiversity databases using an open socio-technical infrastructure and a pragmatic, cross-institutional collaboration

https://pubmed.ncbi.nlm.nih.gov/33816817/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 04/05/2021
Citation.js: a format-independent, modular bibliography tool for the browser and command line

https://pubmed.ncbi.nlm.nih.gov/33816867/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 04/05/2021
A resource to explore the discovery of rare diseases and their causative genes

https://pubmed.ncbi.nlm.nih.gov/33947870/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 05/05/2021
Constructing High-Fidelity Phenotype Knowledge Graphs for Infectious Diseases With a Fine-Grained Semantic Information Model: Development and Usability Study

https://pubmed.ncbi.nlm.nih.gov/34128811/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VSjW0JqT_vVo4exSnaEa8DS8viTn4bOW9m_0JY8UcVGX5Esjj&fc=20220129234853&ff=20251107013730&v=2.18.0.post22+67771e2

wikidata 06/15/2021

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