New items – 100 total

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• Automatic extraction of transcriptional regulatory interactions of bacteria from biomedical literature using a BERT-based approach

  https://pubmed.ncbi.nlm.nih.gov/39213391/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 08/30/2024

• CBGDA: a manually curated resource for gene-disease associations based on genome-wide CRISPR

  https://pubmed.ncbi.nlm.nih.gov/39213392/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 08/30/2024

• Global Globin Network and adopting genomic variant database requirements for thalassemia

  https://pubmed.ncbi.nlm.nih.gov/39231257/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/04/2024

• CuPCA: a web server for pan-cancer association analysis of large-scale cuproptosis-related genes

  https://pubmed.ncbi.nlm.nih.gov/39231258/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/04/2024

• Interactive tools for functional annotation of bacterial genomes

  https://pubmed.ncbi.nlm.nih.gov/39241109/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/06/2024

• Transformer-based approach for symptom recognition and multilingual linking

  https://pubmed.ncbi.nlm.nih.gov/39259689/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/11/2024

• RegulaTome: a corpus of typed, directed, and signed relations between biomedical entities in the scientific literature

  https://pubmed.ncbi.nlm.nih.gov/39265993/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/12/2024

• An analysis of FRE @ BC8 SympTEMIST track: named entity recognition

  https://pubmed.ncbi.nlm.nih.gov/39283593/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/16/2024

• collectNET: a web server for integrated inference of cell-cell communication network

  https://pubmed.ncbi.nlm.nih.gov/39283594/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/16/2024

• Autophagy3D: a comprehensive autophagy structure database

  https://pubmed.ncbi.nlm.nih.gov/39298565/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/19/2024

• Influenza sequence validation and annotation using VADR

  https://pubmed.ncbi.nlm.nih.gov/39297389/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/19/2024

• PeptiHub: a curated repository of precisely annotated cancer-related peptides with advanced utilities for peptide exploration and discovery

  https://pubmed.ncbi.nlm.nih.gov/39308247/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/23/2024

• CPMKG: a condition-based knowledge graph for precision medicine

  https://pubmed.ncbi.nlm.nih.gov/39331730/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/27/2024

• Automated annotation of scientific texts for ML-based keyphrase extraction and validation

  https://pubmed.ncbi.nlm.nih.gov/39331731/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 09/27/2024

• Correction to: The overview of the BioRED (Biomedical Relation Extraction Dataset) track at BioCreative VIII

  https://pubmed.ncbi.nlm.nih.gov/39352950/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/01/2024

• Optimized biomedical entity relation extraction method with data augmentation and classification using GPT-4 and Gemini

  https://pubmed.ncbi.nlm.nih.gov/39383312/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/09/2024

• The relational modeling of hierarchical data in biodiversity databases

  https://pubmed.ncbi.nlm.nih.gov/39389568/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/10/2024

• ELiAH: the atlas of E3 ligases in human tissues for targeted protein degradation with reduced off-target effect

  https://pubmed.ncbi.nlm.nih.gov/39395186/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/12/2024

• StopKB: a comprehensive knowledgebase for nonsense suppression therapies

  https://pubmed.ncbi.nlm.nih.gov/39395187/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/12/2024

• AbAMPdb: a database of Acinetobacter baumannii specific antimicrobial peptides

  https://pubmed.ncbi.nlm.nih.gov/39395188/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/12/2024

• RettDb: the Rett syndrome omics database to navigate the Rett syndrome genomic landscape

  https://pubmed.ncbi.nlm.nih.gov/39414258/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/16/2024

• SMCVdb: a database of experimental cellular toxicity information for drug candidate molecules

  https://pubmed.ncbi.nlm.nih.gov/39423320/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/18/2024

• SesamumGDB: a comprehensive platform for Sesamum genetics and genomics analysis

  https://pubmed.ncbi.nlm.nih.gov/39425944/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/19/2024

• Is metadata of articles about COVID-19 enough for multilabel topic classification task?

  https://pubmed.ncbi.nlm.nih.gov/39432499/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/21/2024

• PheNormGPT: a framework for extraction and normalization of key medical findings

  https://pubmed.ncbi.nlm.nih.gov/39444329/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20241028102601&v=2.18.0.post9+e462414

  Database (Oxford) 10/24/2024

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