New items – 100 total

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• Genome-wide identification of SSR markers from coding regions for endangered Argania spinosa L. skeels and construction of SSR database: AsSSRdb

  https://pubmed.ncbi.nlm.nih.gov/39602824/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 11/27/2024

• The text2term tool to map free-text descriptions of biomedical terms to ontologies

  https://pubmed.ncbi.nlm.nih.gov/39607847/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 11/28/2024

• Probe my Pathway (PmP): a portal to explore the chemical coverage of the human Reactome

  https://pubmed.ncbi.nlm.nih.gov/39657145/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 12/10/2024

• Toward clearer recognition and easier usefulness: development of a cross-lingual atherosclerotic cerebrovascular disease ontology

  https://pubmed.ncbi.nlm.nih.gov/39657146/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 12/10/2024

• AthRiboNC: an Arabidopsis database for ncRNAs with coding potential revealed from ribosome profiling

  https://pubmed.ncbi.nlm.nih.gov/39689042/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 12/17/2024

• scEccDNAdb: an integrated single-cell eccDNA resource for human and mouse

  https://pubmed.ncbi.nlm.nih.gov/39693568/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 12/18/2024

• JTIS: enhancing biomedical document-level relation extraction through joint training with intermediate steps

  https://pubmed.ncbi.nlm.nih.gov/39700498/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 12/19/2024

• MiCK: a database of gut microbial genes linked with chemoresistance in cancer patients

  https://pubmed.ncbi.nlm.nih.gov/39707929/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 12/21/2024

• AneRBC dataset: a benchmark dataset for computer-aided anemia diagnosis using RBC images

  https://pubmed.ncbi.nlm.nih.gov/39721046/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 12/25/2024

• GeniePool 2.0: advancing variant analysis through CHM13-T2T, AlphaMissense, gnomAD V4 integration, and variant co-occurrence queries

  https://pubmed.ncbi.nlm.nih.gov/39729312/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 12/27/2024

• HoloFood Data Portal: holo-omic datasets for analysing host-microbiota interactions in animal production

  https://pubmed.ncbi.nlm.nih.gov/39797569/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/11/2025

• DisGeNet: a disease-centric interaction database among diseases and various associated genes

  https://pubmed.ncbi.nlm.nih.gov/39797570/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/11/2025

• Correction to: The landscape of microRNA interaction annotation: analysis of three rare disorders as a case study

  https://pubmed.ncbi.nlm.nih.gov/39804009/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/13/2025

• LSD600: the first corpus of biomedical abstracts annotated with lifestyle-disease relations

  https://pubmed.ncbi.nlm.nih.gov/39824652/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/17/2025

• Standardized pipelines support and facilitate integration of diverse datasets at the Rat Genome Database

  https://pubmed.ncbi.nlm.nih.gov/39841812/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/22/2025

• A change language for ontologies and knowledge graphs

  https://pubmed.ncbi.nlm.nih.gov/39841813/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/22/2025

• BuffExDb: web-based tissue-specific gene expression resource for breeding and conservation programmes in Bubalus bubalis

  https://pubmed.ncbi.nlm.nih.gov/39854213/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/24/2025

• BbGSD: Black-boned Sheep Genome SNP Database

  https://pubmed.ncbi.nlm.nih.gov/39874126/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/28/2025

• The TOXIN knowledge graph: supporting animal-free risk assessment of cosmetics

  https://pubmed.ncbi.nlm.nih.gov/39879562/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/29/2025

• Helping authors produce FAIR taxonomic data: evaluation of an author-driven phenotype data production prototype

  https://pubmed.ncbi.nlm.nih.gov/39879563/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/29/2025

• Expression of Concern: DisGeNet: a disease-centric interaction database among diseases and various associated genes

  https://pubmed.ncbi.nlm.nih.gov/39888724/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 01/31/2025

• LitSumm: large language models for literature summarization of noncoding RNAs

  https://pubmed.ncbi.nlm.nih.gov/39908113/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 02/05/2025

• Working in biocuration: contemporary experiences and perspectives

  https://pubmed.ncbi.nlm.nih.gov/39937660/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 02/12/2025

• AnnCovDB: a manually curated annotation database for mutations in SARS-CoV-2 spike protein

  https://pubmed.ncbi.nlm.nih.gov/39937661/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 02/12/2025

• Building resource-efficient community databases using open-source software

  https://pubmed.ncbi.nlm.nih.gov/39937662/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250513230638&v=2.18.0.post9+e462414

  Database (Oxford) 02/12/2025

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