New items – 100 total

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• CO-19 PDB 2.0: A Comprehensive COVID-19 Database with Global Auto-Alerts, Statistical Analysis, and Cancer Correlations

  https://pubmed.ncbi.nlm.nih.gov/39066515/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 07/27/2024

• Multi-head CRF classifier for biomedical multi-class named entity recognition on Spanish clinical notes

  https://pubmed.ncbi.nlm.nih.gov/39083461/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 07/31/2024

• Dataset of miRNA-disease relations extracted from textual data using transformer-based neural networks

  https://pubmed.ncbi.nlm.nih.gov/39104284/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/06/2024

• FatPlants: a comprehensive information system for lipid-related genes and metabolic pathways in plants

  https://pubmed.ncbi.nlm.nih.gov/39104285/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/06/2024

• The overview of the BioRED (Biomedical Relation Extraction Dataset) track at BioCreative VIII

  https://pubmed.ncbi.nlm.nih.gov/39114977/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/08/2024

• SoDCoD: a comprehensive database of Cu/Zn superoxide dismutase conformational diversity caused by ALS-linked gene mutations and other perturbations

  https://pubmed.ncbi.nlm.nih.gov/39126203/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/10/2024

• The biomedical relationship corpus of the BioRED track at the BioCreative VIII challenge and workshop

  https://pubmed.ncbi.nlm.nih.gov/39126204/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/10/2024

• Functional implications of glycans and their curation: insights from the workshop held at the 16th Annual International Biocuration Conference in Padua, Italy

  https://pubmed.ncbi.nlm.nih.gov/39137905/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/13/2024

• ncStem: a comprehensive resource of curated and predicted ncRNAs in cancer stemness

  https://pubmed.ncbi.nlm.nih.gov/39137906/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/13/2024

• GMMID: genetically modified mice information database

  https://pubmed.ncbi.nlm.nih.gov/39163546/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/20/2024

• Advancing microbiome research through standardized data and metadata collection: introducing the Microbiome Research Data Toolkit

  https://pubmed.ncbi.nlm.nih.gov/39167718/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/21/2024

• RiceMetaSys: Drought-miR, a one-stop solution for drought responsive miRNAs-mRNA module in rice

  https://pubmed.ncbi.nlm.nih.gov/39167719/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/21/2024

• Autoinhibited Protein Database: a curated database of autoinhibitory domains and their autoinhibition mechanisms

  https://pubmed.ncbi.nlm.nih.gov/39192607/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/28/2024

• Integrating deep learning architectures for enhanced biomedical relation extraction: a pipeline approach

  https://pubmed.ncbi.nlm.nih.gov/39197056/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/28/2024

• Recognition and normalization of multilingual symptom entities using in-domain-adapted BERT models and classification layers

  https://pubmed.ncbi.nlm.nih.gov/39197057/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/28/2024

• The Australian Biosecurity Genomic Database: a new resource for high-throughput sequencing analysis based on the National Notifiable Disease List of Terrestrial Animals

  https://pubmed.ncbi.nlm.nih.gov/39197058/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/28/2024

• MACSFeD-a database of mosquito acoustic communication and swarming features

  https://pubmed.ncbi.nlm.nih.gov/39197059/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/28/2024

• Acupuncture indication knowledge bases: meridian entity recognition and classification based on ACUBERT

  https://pubmed.ncbi.nlm.nih.gov/39213389/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/30/2024

• Landscape of racial and ethnic health disparities in the All of Us Research Program

  https://pubmed.ncbi.nlm.nih.gov/39213390/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/30/2024

• Automatic extraction of transcriptional regulatory interactions of bacteria from biomedical literature using a BERT-based approach

  https://pubmed.ncbi.nlm.nih.gov/39213391/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/30/2024

• CBGDA: a manually curated resource for gene-disease associations based on genome-wide CRISPR

  https://pubmed.ncbi.nlm.nih.gov/39213392/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 08/30/2024

• Global Globin Network and adopting genomic variant database requirements for thalassemia

  https://pubmed.ncbi.nlm.nih.gov/39231257/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 09/04/2024

• CuPCA: a web server for pan-cancer association analysis of large-scale cuproptosis-related genes

  https://pubmed.ncbi.nlm.nih.gov/39231258/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 09/04/2024

• Interactive tools for functional annotation of bacterial genomes

  https://pubmed.ncbi.nlm.nih.gov/39241109/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 09/06/2024

• Transformer-based approach for symptom recognition and multilingual linking

  https://pubmed.ncbi.nlm.nih.gov/39259689/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20250605184530&v=2.18.0.post9+e462414

  Database (Oxford) 09/11/2024

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