New items – 100 total

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• Biomedical literature-based clinical phenotype definition discovery using large language models

  https://pubmed.ncbi.nlm.nih.gov/40996710/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• ScLineageAtlas: a comprehensive single-cell genomics database for characterizing cellular clones in cancer

  https://pubmed.ncbi.nlm.nih.gov/40996711/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• StrainInfo-the central database for linked microbial strain identifiers

  https://pubmed.ncbi.nlm.nih.gov/40996712/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• BrAPI v2: real-world applications for data integration and collaboration in the breeding and genetics community

  https://pubmed.ncbi.nlm.nih.gov/40996713/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• GExplore 1.5: a comprehensive Caenorhabditis elegans database for the analysis of gene function with a new user-friendly web interface

  https://pubmed.ncbi.nlm.nih.gov/40996714/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• A new database of chestnut DNA fingerprints for genetic diversity assessment, precise varietal identification, and traceability

  https://pubmed.ncbi.nlm.nih.gov/40996715/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• The state of the human coding gene catalogues

  https://pubmed.ncbi.nlm.nih.gov/40996716/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• DrugCombo: an informatics bridge for anticancer drug combination Phase I trial design

  https://pubmed.ncbi.nlm.nih.gov/40996717/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• A novel taxonomic database for eukaryotic mitochondrial cytochrome oxidase subunit I gene (eKOI), with a focus on protists diversity

  https://pubmed.ncbi.nlm.nih.gov/40996718/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• An open-source multi-semantic annotation dataset and automated recognition tool for viral carcinogenesis factors

  https://pubmed.ncbi.nlm.nih.gov/40996719/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• Correction to: CardioHotspots: a database of mutational hotspots for cardiac disorders

  https://pubmed.ncbi.nlm.nih.gov/40996720/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/25/2025

• VineColD: an integrative database for global historical tracing and real-time monitoring of grapevine cold hardiness

  https://pubmed.ncbi.nlm.nih.gov/41014096/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/27/2025

• Navigating open-source waters: the pharmaceutical industry's role in bioontology development

  https://pubmed.ncbi.nlm.nih.gov/41026496/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/30/2025

• Characterization and automated classification of sentences in the biomedical literature: a case study for biocuration of gene expression and protein kinase activity

  https://pubmed.ncbi.nlm.nih.gov/41026497/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 09/30/2025

• CobVar-a comprehensive resource of vitamin B12-associated genomic variants

  https://pubmed.ncbi.nlm.nih.gov/41031637/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 10/01/2025

• Zoonosis: a comprehensive database of zoonotic pathogens

  https://pubmed.ncbi.nlm.nih.gov/41092271/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 10/15/2025

• Review of autism spectrum disorder databases for the identification of candidate genes

  https://pubmed.ncbi.nlm.nih.gov/41092272/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 10/15/2025

• SEND: a suite of tools for the easy sharing of linked biological data

  https://pubmed.ncbi.nlm.nih.gov/41158062/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 10/29/2025

• ENcyclopedia of TRAnscription Factors in Bacteria and Archaea genomes (ENTRAF) version 2.0

  https://pubmed.ncbi.nlm.nih.gov/41158063/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 10/29/2025

• ROSBASE1.0: a comprehensive database of reactive oxygen species (ROS): categorization of cell organelles, proteins, taxonomy, and diseases based on ROS-related activities

  https://pubmed.ncbi.nlm.nih.gov/41171287/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 10/31/2025

• InTxDB: interaction data between gram-negative bacteria secreted effectors and host proteins

  https://pubmed.ncbi.nlm.nih.gov/41171288/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 10/31/2025

• Liposomal Cancer Drug Database (LCDD): a comprehensive resource for liposome research in cancer therapy and diagnosis

  https://pubmed.ncbi.nlm.nih.gov/41171289/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 10/31/2025

• PASS2: update of database of structure-based sequence alignments

  https://pubmed.ncbi.nlm.nih.gov/41230635/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 11/13/2025

• Genomic Predicted cross performance: a tool for optimizing parental combinations in breeding programs

  https://pubmed.ncbi.nlm.nih.gov/41243822/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 11/17/2025

• PolED: a manually curated database of functional studies of POLE and POLD1 variants reported in humans

  https://pubmed.ncbi.nlm.nih.gov/41263451/?utm_source=Other&utm_medium=rss&utm_campaign=journals&utm_content=101517697&fc=None&ff=20260225140628&v=2.18.0.post22+67771e2

  Database (Oxford) 11/20/2025

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