OMA orthology in 2024: improved prokaryote coverage, ancestral and extant GO enrichment, a revamped synteny viewer and more in the OMA Ecosystem

(database[TitleAbstract]) AND (Nucleic acids research[Journal]) 2024-04-28

Summary:

In this update paper, we present the latest developments in the OMA browser knowledgebase, which aims to provide high-quality orthology inferences and facilitate the study of gene families, genomes and their evolution. First, we discuss the addition of new species in the database, particularly an expanded representation of prokaryotic species. The OMA browser now offers Ancestral Genome pages and an Ancestral Gene Order viewer, allowing users to explore the evolutionary history and gene content...

Link:

https://pubmed.ncbi.nlm.nih.gov/37962356/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VsHRGSo3HX0CgC40wRgBdaScQKv8CRE2sO_GaWJzhPEXTSQfX&fc=20220129230418&ff=20240428090854&v=2.18.0.post9+e462414

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📚BioDBS Bibliography » (database[TitleAbstract]) AND (Nucleic acids research[Journal])

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Authors:

Adrian M Altenhoff, Alex Warwick Vesztrocy, Charles Bernard, Clement-Marie Train, Alina Nicheperovich, Silvia Prieto Baños, Irene Julca, David Moi, Yannis Nevers, Sina Majidian, Christophe Dessimoz, Natasha M Glover

Date tagged:

04/28/2024, 09:09

Date published:

11/14/2023, 06:00