jPOST environment accelerates the reuse and reanalysis of public proteome mass spectrometry data

(database[TitleAbstract]) AND (Nucleic acids research[Journal]) 2024-11-14

Summary:

jPOST (https://jpostdb.org/) comprises jPOSTrepo (https://repository.jpostdb.org/) (over 2000 projects), a repository for proteome mass spectrometry data, the reanalysis of raw proteome data based on a standardised protocol using UniScore, and jPOSTdb (https://globe.jpostdb.org/) (over 600 datasets), a database that integrates the reanalysed data. The jPOST reanalysis protocol rescores MS/MS spectra using a new scale, UniScore, to evaluate the extent to which the spectral peaks correspond to the...

Link:

https://pubmed.ncbi.nlm.nih.gov/39526391/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VsHRGSo3HX0CgC40wRgBdaScQKv8CRE2sO_GaWJzhPEXTSQfX&fc=20220129230418&ff=20241114182649&v=2.18.0.post9+e462414

From feeds:

📚BioDBS Bibliography » (database[TitleAbstract]) AND (Nucleic acids research[Journal])

Authors:

Shujiro Okuda, Akiyasu C Yoshizawa, Daiki Kobayashi, Yushi Takahashi, Yu Watanabe, Yuki Moriya, Atsushi Hatano, Tomoyo Takami, Masaki Matsumoto, Norie Araki, Tsuyoshi Tabata, Mio Iwasaki, Naoyuki Sugiyama, Yoshio Kodera, Satoshi Tanaka, Susumu Goto, Shin Kawano, Yasushi Ishihama

Date tagged:

11/14/2024, 18:28

Date published:

11/11/2024, 06:00