MirGeneDB 3.0: improved taxonomic sampling, uniform nomenclature of novel conserved microRNA families and updated covariance models

(database[TitleAbstract]) AND (Nucleic acids research[Journal]) 2025-03-07

Summary:

We present a major update of MirGeneDB (3.0), the manually curated animal microRNA gene database. Beyond moving to a new server and the creation of a computational mirror, we have expanded the database with the addition of 33 invertebrate species, including representatives of 5 previously unsampled phyla, and 6 mammal species. MirGeneDB now contains entries for 21 822 microRNA genes (5160 of these from the new species) belonging to 1743 microRNA families. The inclusion of these new species...

Link:

https://pubmed.ncbi.nlm.nih.gov/39673268/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VsHRGSo3HX0CgC40wRgBdaScQKv8CRE2sO_GaWJzhPEXTSQfX&fc=20220129230418&ff=20250307180207&v=2.18.0.post9+e462414

From feeds:

📚BioDBS Bibliography » (database[TitleAbstract]) AND (Nucleic acids research[Journal])

Authors:

Alexander W Clarke, Eirik Høye, Anju Angelina Hembrom, Vanessa Molin Paynter, Jakob Vinther, Łukasz Wyrożemski, Inna Biryukova, Alessandro Formaggioni, Vladimir Ovchinnikov, Holger Herlyn, Alexandra Pierce, Charles Wu, Morteza Aslanzadeh, Jeanne Cheneby, Pedro Martinez, Marc R Friedländer, Eivind Hovig, Michael Hackenberg, Sinan Uğur Umu, Morten Johansen, Kevin J Peterson, Bastian Fromm

Date tagged:

03/07/2025, 18:02

Date published:

12/14/2024, 06:00