Summary:
JASPAR (https://jaspar.elixir.no/) is an open-access database that has provided high-quality, manually curated, and non-redundant DNA binding profiles for transcription factors (TFs) as position frequency matrices (PFMs) for over 20 years. We expanded the CORE (306 new profiles, 12% increase) and UNVALIDATED (433, 60% increase) collections with new PFMs and updated 13 existing profiles. We updated the TF binding site predictions and genome tracks for eight species. TF binding profile clusters...
Link:
https://pubmed.ncbi.nlm.nih.gov/41325984/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VsHRGSo3HX0CgC40wRgBdaScQKv8CRE2sO_GaWJzhPEXTSQfX&fc=20220129230418&ff=20260119192901&v=2.18.0.post22+67771e2
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(database[TitleAbstract]) AND (Nucleic acids research[Journal])
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Authors:
Damla Ovek Baydar, Ieva Rauluseviciute, Dina R Aronsen, Romain Blanc-Mathieu, Ine Bonthuis, Herman de Beukelaer, Katalin Ferenc, Alice Jegou, Vipin Kumar, Roza Berhanu Lemma, Jérémy Lucas, Mathis Pochon, Chang M Yun, Vivekanandan Ramalingam, Salil Sanjay Deshpande, Aman Patel, Georgi K Marinov, Austin T Wang, Alejandro Aguirre, Jaime A Castro-Mondragon, Damir Baranasic, Jeanne Chèneby, Sveinung Gundersen, Morten Johansen, Aziz Khan, Marieke L Kuijjer, Eivind Hovig, Boris Lenhard, Albin Sandelin, Klaas Vandepoele, Wyeth W Wasserman, François Parcy, Anshul Kundaje, Anthony Mathelier
Date tagged:
01/19/2026, 19:29
Date published:
12/01/2025, 06:00