JoGo 1.0: the ACTG hierarchical nomenclature and database covering 4.7 million haplotypes across 19,194 human genes

(database[TitleAbstract]) AND (Nucleic acids research[Journal]) 2026-01-23

Summary:

The Joint Open Genome and Omics Platform 1.0 (JoGo) is a global, long-read-based human haplotype database covering 19 194 MANE-standardized protein-coding genes. JoGo introduces a novel ACTG hierarchical nomenclature-A (amino acid), C (coding), T (transcript), and G (gene body)-that assigns numeric identifiers in descending order of global frequency. Using high-fidelity long-read sequencing, we assembled haplotype-resolved contigs for 258 globally sampled genomes, including 108 sequenced...

Link:

https://pubmed.ncbi.nlm.nih.gov/41316730/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VsHRGSo3HX0CgC40wRgBdaScQKv8CRE2sO_GaWJzhPEXTSQfX&fc=20220129230418&ff=20260123041624&v=2.18.0.post22+67771e2

From feeds:

📚BioDBS Bibliography » (database[TitleAbstract]) AND (Nucleic acids research[Journal])

Authors:

Masao Nagasaki, Toshiaki Katayama, Yuki Moriya, Yayoi Sekiya, Shuichi Kawashima, Ryo Teraoka, Shuto Machida, Taichi Matsubara, Hiroki Hashimoto, Akihiro Asakura, Akio Nagano, Riu Yamashita, Toyoyuki Takada, Nobutaka Mitsuhashi, Mayumi Kamada, Yasuyuki Ohkawa, Katsushi Tokunaga, Yosuke Kawai, Variant Information Standardization Collegium

Date tagged:

01/23/2026, 04:21

Date published:

11/29/2025, 06:00