dbCAN-seq update: CAZyme gene clusters and substrates in microbiomes

(database[TitleAbstract]) AND (Nucleic acids research[Journal]) 2023-02-15

Summary:

Carbohydrate Active EnZymes (CAZymes) are significantly important for microbial communities to thrive in carbohydrate rich environments such as animal guts, agricultural soils, forest floors, and ocean sediments. Since 2017, microbiome sequencing and assembly have produced numerous metagenome assembled genomes (MAGs). We have updated our dbCAN-seq database (https://bcb.unl.edu/dbCAN_seq) to include the following new data and features: (i) ∼498 000 CAZymes and ∼169 000 CAZyme gene clusters (CGCs)...

Link:

https://pubmed.ncbi.nlm.nih.gov/36399503/?utm_source=Other&utm_medium=rss&utm_campaign=pubmed-2&utm_content=1VsHRGSo3HX0CgC40wRgBdaScQKv8CRE2sO_GaWJzhPEXTSQfX&fc=20220129230418&ff=20230215011356&v=2.17.9.post6+86293ac

From feeds:

📚BioDBS Bibliography » (database[TitleAbstract]) AND (Nucleic acids research[Journal])

Tags:

Authors:

Jinfang Zheng, Boyang Hu, Xinpeng Zhang, Qiwei Ge, Yuchen Yan, Jerry Akresi, Ved Piyush, Le Huang, Yanbin Yin

Date tagged:

02/15/2023, 01:13

Date published:

11/18/2022, 06:00